Computes a transform using the 'iplogicle' function
Extract of a Graft versus Host Disease monitoring experiment (Rizzieri et al., 2007)
Create the definition of an arcsinh transformation function (base specified by user) to be applied on a data set
Compute a transform using the 'biexponential' function
Fix the offset when its values recorded in header and TEXT don't agree
Coerce the list of the keywords into a character Also flatten spillover matrix into a string
Methods to apply functions over flowFrame margins
Estimates a common logicle transformation for a flowSet.
A class for representing filtering operations to be applied to flow data.
Methods for Function %on% in Package 'flowCore'
flowCore: Basic structures for flow cytometry data
'flowFrame': a class for storing observed quantitative properties for a population of cells from a FACS run
'flowSet': a class for storing flow cytometry raw data from quantitative cell-based assays
Apply a Function over values in a flowSet
get channel and marker information from a 'flowFrame' that matches to the given keyword
Extract Index Sorted Data from an FCS File
Computes the inverse of the transform defined by the 'logicleTransform' function or the transformList generated by 'estimateLogicle' function
Methods to retrieve keywords of a flowFrame
Create the definition of a linear transformation function to be applied on a data set
Create the definition of a ln transformation function (natural logarthim) to be applied on a data set
Create the definition of a log transformation function (base specified by user) to be applied on a data set
Computes a transform using the 'logicle_transform' function
Obtain information about parameters for flow cytometry objects.
Create the definition of a quadratic transformation function to be applied on a data set
Create the definition of a scale transformation function to be applied on a data set
Simplified geometric translation of gates
Methods to split flowFrames and flowSets according to filters
Compute the split-scale transformation describe by FL. Battye
'transform': a class for transforming flow-cytometry data by applying scale factors.
A class for encapsulating a filter to be performed on transformed parameters
A class for mapping transforms between parameters
Simplified geometric transformation of gates
Create the definition of a truncate transformation function to be applied on a data set
modify description to reflect the transformation Involve inserting/updating 'transformation' and flowCore_$PnRmax keywords
Check if all filters in a filters matches same paramters